HL_3JBV_087
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 3JBV|1|b|A|1913
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JBV_087 not in the Motif Atlas
- Homologous match to HL_9DFE_046
- Geometric discrepancy: 0.4729
- The information below is about HL_9DFE_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_82185.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
3JBV|1|b|G|1910
3JBV|1|b|U|1911
3JBV|1|b|A|1912
3JBV|1|b|A|1913
3JBV|1|b|C|1914
3JBV|1|b|U|1915
3JBV|1|b|A|1916
3JBV|1|b|U|1917
3JBV|1|b|A|1918
3JBV|1|b|A|1919
3JBV|1|b|C|1920
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain L
- 30S ribosomal protein S12
- Chain V
- Transfer RNA; tRNA
Coloring options: