3D structure

PDB id
3JCE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GCUUAGGC
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_3JCE_025 not in the Motif Atlas
Homologous match to HL_5J7L_149
Geometric discrepancy: 0.3602
The information below is about HL_5J7L_149
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_09452.1
Basepair signature
cWW-F-F-F
Number of instances in this motif group
3

Unit IDs

3JCE|1|A|G|543
3JCE|1|A|C|544
3JCE|1|A|U|545
3JCE|1|A|U|546
3JCE|1|A|A|547
3JCE|1|A|G|548
3JCE|1|A|G|549
3JCE|1|A|C|550

Current chains

Chain A
23 ribosomal RNA

Nearby chains

Chain J
50S ribosomal protein L13
Chain R
50S ribosomal protein L21

Coloring options:


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