HL_3JCE_032

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

3JCE|1|A|A|781, 3JCE|1|A|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JCE_032 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.2872

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

3JCE|1|A|U|779
3JCE|1|A|G|780
3JCE|1|A|A|781
3JCE|1|A|A|782
3JCE|1|A|A|783
3JCE|1|A|G|784
3JCE|1|A|G|785

Current chains

Chain A

23 ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2