HL_3JCE_033

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

3JCE|1|A|U|827, 3JCE|1|A|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JCE_033 not in the Motif Atlas

Homologous match to HL_7RQB_025

Geometric discrepancy: 0.1105

The information below is about HL_7RQB_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53619.1

Basepair signature

cWW-F-F

Number of instances in this motif group

11

Unit IDs

3JCE|1|A|U|826
3JCE|1|A|U|827
3JCE|1|A|U|828
3JCE|1|A|A|829
3JCE|1|A|G|830
3JCE|1|A|G|831

Current chains

Chain A

23 ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15