HL_3JCE_114

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UCAACCGA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JCE_114 not in the Motif Atlas

Geometric match to HL_6CF2_001

Geometric discrepancy: 0.2781

The information below is about HL_6CF2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87553.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

3JCE|1|A|U|224
3JCE|1|A|C|225
3JCE|1|A|A|226
3JCE|1|A|A|227
3JCE|1|A|C|228
3JCE|1|A|C|229
3JCE|1|A|G|230
3JCE|1|A|A|231

Current chains

Chain A

23 ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15