HL_3JCE_123
3D structure
- PDB id
- 3JCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUCAGAGAUGAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JCE_123 not in the Motif Atlas
- Homologous match to HL_5J7L_216
- Geometric discrepancy: 0.3627
- The information below is about HL_5J7L_216
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78284.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
3JCE|1|a|U|1009
3JCE|1|a|U|1010
3JCE|1|a|C|1011
3JCE|1|a|A|1012
3JCE|1|a|G|1013
3JCE|1|a|A|1014
3JCE|1|a|G|1015
3JCE|1|a|A|1016
3JCE|1|a|U|1017
3JCE|1|a|G|1018
3JCE|1|a|A|1019
3JCE|1|a|G|1020
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain n
- 30S ribosomal protein S14
- Chain s
- 30S ribosomal protein S19
Coloring options: