HL_3JCJ_094

3D structure

PDB id

3JCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

3JCJ|1|g|U|1029, 3JCJ|1|g|U|1030, 3JCJ|1|g|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3JCJ_094 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.3749

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

3JCJ|1|g|C|1028
3JCJ|1|g|U|1029
3JCJ|1|g|U|1030
3JCJ|1|g|C|1031
3JCJ|1|g|G|1032
3JCJ|1|g|G|1033

Current chains

Chain g

16S ribosomal RNA

Nearby chains