HL_3JCJ_124
3D structure
- PDB id
- 3JCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGAUGCAACGCG
- Length
- 12 nucleotides
- Bulged bases
- 3JCJ|1|g|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JCJ_124 not in the Motif Atlas
- Geometric match to HL_8KAH_003
- Geometric discrepancy: 0.2772
- The information below is about HL_8KAH_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89457.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
3JCJ|1|g|C|962
3JCJ|1|g|G|963
3JCJ|1|g|A|964
3JCJ|1|g|U|965
3JCJ|1|g|G|966
3JCJ|1|g|C|967
3JCJ|1|g|A|968
3JCJ|1|g|A|969
3JCJ|1|g|C|970
3JCJ|1|g|G|971
3JCJ|1|g|C|972
3JCJ|1|g|G|973
Current chains
- Chain g
- 16S ribosomal RNA
Nearby chains
- Chain o
- 30S ribosomal protein S9
- Chain r
- 30S ribosomal protein S10
- Chain s
- 30S ribosomal protein S13
- Chain v
- Transfer RNA; tRNA
- Chain w
- 30S ribosomal protein S14
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