HL_3JCN_049
3D structure
- PDB id
- 3JCN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 3JCN|1|A|U|1955
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JCN_049 not in the Motif Atlas
- Homologous match to HL_4WF9_046
- Geometric discrepancy: 0.0963
- The information below is about HL_4WF9_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_61418.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
3JCN|1|A|G|1949
3JCN|1|A|G|1950
3JCN|1|A|U|1951
3JCN|1|A|A|1952
3JCN|1|A|A|1953
3JCN|1|A|G|1954
3JCN|1|A|U|1955
3JCN|1|A|U|1956
3JCN|1|A|C|1957
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain K
- 50S ribosomal protein L14
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: