HL_3JCN_060
3D structure
- PDB id
- 3JCN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- AGUUCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JCN_060 not in the Motif Atlas
- Homologous match to HL_4WF9_056
- Geometric discrepancy: 0.141
- The information below is about HL_4WF9_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
3JCN|1|A|A|2471
3JCN|1|A|G|2472
3JCN|1|A|U|2473
3JCN|1|A|U|2474
3JCN|1|A|C|2475
3JCN|1|A|A|2476
3JCN|1|A|U|2477
3JCN|1|A|A|2478
3JCN|1|A|U|2479
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain M
- 50S ribosomal protein L16
- Chain b
- Translation initiation factor IF-2
Coloring options: