HL_3JCN_086
3D structure
- PDB id
- 3JCN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3JCN_086 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.0842
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
3JCN|1|a|C|689
3JCN|1|a|G|690
3JCN|1|a|G|691
3JCN|1|a|U|692
3JCN|1|a|G|693
3JCN|1|a|A|694
3JCN|1|a|A|695
3JCN|1|a|A|696
3JCN|1|a|U|697
3JCN|1|a|G|698
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain h
- 30S ribosomal protein S7
- Chain l
- 30S ribosomal protein S11
- Chain w
- 30S ribosomal protein S21
- Chain z
- messenger RNA
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