HL_3JCS_033
3D structure
- PDB id
- 3JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGCAUCAG
- Length
- 8 nucleotides
- Bulged bases
- 3JCS|1|2|C|29, 3JCS|1|2|U|31, 3JCS|1|2|A|33
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_55724.1
- Basepair signature
- cWW-R-R
- Number of instances in this motif group
- 18
Unit IDs
3JCS|1|2|C|27
3JCS|1|2|G|28
3JCS|1|2|C|29
3JCS|1|2|A|30
3JCS|1|2|U|31
3JCS|1|2|C|32
3JCS|1|2|A|33
3JCS|1|2|G|34
Current chains
- Chain 2
- 26S delta ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain C
- ribosomal protein L4
- Chain T
- ribosomal protein L22
- Chain j
- ribosomal protein L37e
- Chain l
- ribosomal protein L39e
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