HL_3PIO_064
3D structure
- PDB id
- 3PIO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.25 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 3PIO|1|X|G|2731
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3PIO_064 not in the Motif Atlas
- Homologous match to HL_7A0S_065
- Geometric discrepancy: 0.1936
- The information below is about HL_7A0S_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53269.3
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 11
Unit IDs
3PIO|1|X|C|2725
3PIO|1|X|U|2726
3PIO|1|X|G|2727
3PIO|1|X|A|2728
3PIO|1|X|A|2729
3PIO|1|X|A|2730
3PIO|1|X|G|2731
3PIO|1|X|C|2732
3PIO|1|X|A|2733
3PIO|1|X|U|2734
3PIO|1|X|C|2735
3PIO|1|X|U|2736
3PIO|1|X|A|2737
3PIO|1|X|A|2738
3PIO|1|X|G|2739
Current chains
- Chain X
- RIBOSOMAL 23S RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain E
- 50S ribosomal protein L6
- Chain G
- 50S ribosomal protein L13
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