HL_3SKI_001
3D structure
- PDB id
- 3SKI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'-deoxyguanosine
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.3 Å
Loop
- Sequence
- CAUAAUGGG
- Length
- 9 nucleotides
- Bulged bases (A, C, G, U)
- 44U
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86769.3
- Basepair signature
- cWW-F-cSS-cSH
- Number of instances in this motif group
- 6
Unit IDs
3SKI|1|A|C|39
3SKI|1|A|A|40
3SKI|1|A|U|41
3SKI|1|A|A|42
3SKI|1|A|A|43
3SKI|1|A|U|44
3SKI|1|A|G|45
3SKI|1|A|G|46
3SKI|1|A|G|47
Current chains
- Chain A
- RNA (68-MER)
Nearby chains
- Chain B
- RNA (68-MER)
Coloring options: