3SKI Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3SKI_001 | 1/A/39:47 | No text annotation HL_20743.5 | ||
| HL_3SKI_002 | 1/A/53:60 | Pseudoknot geometry HL_93324.4 | ||
| HL_3SKI_003 | 1/A/67:72 | No text annotation HL_48417.5 | ||
| HL_3SKI_004 | 1/B/39:47 | No text annotation | geometric HL_3SKI_001 HL_20743.5 | |
| HL_3SKI_005 | 1/B/53:60 | Pseudoknot geometry | geometric HL_3SKL_005 HL_93324.4 | |
| HL_3SKI_006 | 1/B/67:72 | No text annotation | geometric HL_3SKI_003 HL_48417.5 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_3SKI_001 | 1/A/30:34, 1/A/52:61, 1/A/78:81 | No text annotation J3_44163.1 | ||
| J3_3SKI_002 | 1/B/30:34, 1/B/52:61, 1/B/78:81 | No text annotation | geometric J3_3SKL_002 J3_44163.1 | |
| J4_3SKI_001 | 1/A/30:34, 1/A/52:53, 1/A/60:61, 1/A/78:81 | Purine riboswitch J4_07491.1 | ||
| J4_3SKI_002 | 1/B/30:34, 1/B/52:53, 1/B/60:61, 1/B/78:81 | No text annotation |
Problematic loops
No problematic loops
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