HL_3U5H_008

3D structure

PDB id

3U5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 60S subunit, ribosome B

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUUGGGAAUG

Length

10 nucleotides

Bulged bases

3U5H|1|5|G|283, 3U5H|1|5|A|284, 3U5H|1|5|A|285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90792.1

Basepair signature

cWW-cWW-R-R-R-R

Number of instances in this motif group

4

Unit IDs

3U5H|1|5|U|278
3U5H|1|5|U|279
3U5H|1|5|U|280
3U5H|1|5|G|281
3U5H|1|5|G|282
3U5H|1|5|G|283
3U5H|1|5|A|284
3U5H|1|5|A|285
3U5H|1|5|U|286
3U5H|1|5|G|287

Current chains

Chain 5

25S rRNA

Nearby chains