HL_4A1B_045
3D structure
- PDB id
- 4A1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophila 60S ribosomal subunit in complex with initiation factor 6. This file contains 26S rRNA and proteins of molecule 3.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.52 Å
Loop
- Sequence
- UUUAAUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 4A1B|1|1|A|2134, 4A1B|1|1|A|2135, 4A1B|1|1|U|2136, 4A1B|1|1|A|2140
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_85534.6
- Basepair signature
- cWW-tWH-tWH-R
- Number of instances in this motif group
- 9
Unit IDs
4A1B|1|1|U|2131
4A1B|1|1|U|2132
4A1B|1|1|U|2133
4A1B|1|1|A|2134
4A1B|1|1|A|2135
4A1B|1|1|U|2136
4A1B|1|1|A|2137
4A1B|1|1|A|2138
4A1B|1|1|A|2139
4A1B|1|1|A|2140
4A1B|1|1|A|2141
Current chains
- Chain 1
- 26S RRNA
Nearby chains
- Chain A
- RIBOSOMAL PROTEIN L37
Coloring options: