HL_4A2I_023

3D structure

PDB id

4A2I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-electron Microscopy Structure of the 30S Subunit in Complex with the YjeQ Biogenesis Factor

Experimental method

ELECTRON MICROSCOPY

Resolution

16.5 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4A2I|1|A|U|1030, 4A2I|1|A|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4A2I_023 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3581

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

4A2I|1|A|C|1028
4A2I|1|A|U|1029
4A2I|1|A|U|1030
4A2I|1|A|C|1031
4A2I|1|A|G|1032
4A2I|1|A|G|1033

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains