HL_4BTS_026

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GACUCAACAC

Length

10 nucleotides

Bulged bases

4BTS|1|AA|A|1168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4BTS_026 not in the Motif Atlas

Homologous match to HL_4V88_212

Geometric discrepancy: 0.1777

The information below is about HL_4V88_212

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.1

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

4BTS|1|AA|G|1160
4BTS|1|AA|A|1161
4BTS|1|AA|C|1162
4BTS|1|AA|U|1163
4BTS|1|AA|C|1164
4BTS|1|AA|A|1165
4BTS|1|AA|A|1166
4BTS|1|AA|C|1167
4BTS|1|AA|A|1168
4BTS|1|AA|C|1169

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain A9

40S RIBOSOMAL PROTEIN RPS31E

Chain AI

40S RIBOSOMAL PROTEIN RPS16E

Chain AJ

40S RIBOSOMAL PROTEIN RPS20E

Chain AN

40S RIBOSOMAL PROTEIN RPS29E