HL_4BTS_029

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GUUAAUUC

Length

8 nucleotides

Bulged bases

4BTS|1|AA|U|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4BTS_029 not in the Motif Atlas

Homologous match to HL_4V88_215

Geometric discrepancy: 0.0992

The information below is about HL_4V88_215

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

4BTS|1|AA|G|1281
4BTS|1|AA|U|1282
4BTS|1|AA|U|1283
4BTS|1|AA|A|1284
4BTS|1|AA|A|1285
4BTS|1|AA|U|1286
4BTS|1|AA|U|1287
4BTS|1|AA|C|1288

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain AV

40S RIBOSOMAL PROTEIN RPS17E