HL_4CSU_019
3D structure
- PDB id
- 4CSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with ObgE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- UUUUGUAUAA
- Length
- 10 nucleotides
- Bulged bases
- 4CSU|1|B|A|574
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4CSU_019 not in the Motif Atlas
- Geometric match to HL_5TBW_014
- Geometric discrepancy: 0.2304
- The information below is about HL_5TBW_014
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
4CSU|1|B|U|566
4CSU|1|B|U|567
4CSU|1|B|U|568
4CSU|1|B|U|569
4CSU|1|B|G|570
4CSU|1|B|U|571
4CSU|1|B|A|572
4CSU|1|B|U|573
4CSU|1|B|A|574
4CSU|1|B|A|575
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain D
- 50S RIBOSOMAL PROTEIN L3
- Chain L
- 50S RIBOSOMAL PROTEIN L15
- Chain Q
- 50S RIBOSOMAL PROTEIN L20
- Chain R
- 50S RIBOSOMAL PROTEIN L21
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