HL_4CSU_053

3D structure

PDB id

4CSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with ObgE

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

ACGCCAGU

Length

8 nucleotides

Bulged bases

4CSU|1|B|C|2145, 4CSU|1|B|C|2146, 4CSU|1|B|A|2147

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4CSU_053 not in the Motif Atlas

Homologous match to HL_5J7L_184

Geometric discrepancy: 0.5659

The information below is about HL_5J7L_184

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79299.1

Basepair signature

cWW-tSW-R

Number of instances in this motif group

44

Unit IDs

4CSU|1|B|A|2142
4CSU|1|B|C|2143
4CSU|1|B|G|2144
4CSU|1|B|C|2145
4CSU|1|B|C|2146
4CSU|1|B|A|2147
4CSU|1|B|G|2148
4CSU|1|B|U|2149

Current chains

Chain B

23S RRNA

Nearby chains