HL_4CSU_059

3D structure

PDB id

4CSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with ObgE

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

GUGACGGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4CSU_059 not in the Motif Atlas

Homologous match to HL_7A0S_056

Geometric discrepancy: 0.3344

The information below is about HL_7A0S_056

Detailed Annotation

GNRA with extra cWW

Broad Annotation

GNRA with extra cWW

Motif group

HL_04259.3

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4CSU|1|B|G|2355
4CSU|1|B|U|2356
4CSU|1|B|G|2357
4CSU|1|B|A|2358
4CSU|1|B|C|2359
4CSU|1|B|G|2360
4CSU|1|B|G|2361
4CSU|1|B|C|2362

Current chains

Chain B

23S RRNA

Nearby chains

Chain 7

50S RIBOSOMAL PROTEIN L35

Chain L

50S RIBOSOMAL PROTEIN L15

Chain Y

50S RIBOSOMAL PROTEIN L27