HL_4CSU_066

3D structure

PDB id

4CSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with ObgE

Experimental method

ELECTRON MICROSCOPY

Resolution

5.5 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

4CSU|1|B|A|2660

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4CSU_066 not in the Motif Atlas

Geometric match to HL_5J7L_179

Geometric discrepancy: 0.1163

The information below is about HL_5J7L_179

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

4CSU|1|B|C|2658
4CSU|1|B|G|2659
4CSU|1|B|A|2660
4CSU|1|B|G|2661
4CSU|1|B|A|2662
4CSU|1|B|G|2663

Current chains

Chain B

23S RRNA

Nearby chains

Chain 9

GTPASE OBGE/CGTA

Chain G

50S RIBOSOMAL PROTEIN L6