3D structure

PDB id
4CSU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structures of the 50S ribosome subunit bound with ObgE
Experimental method
ELECTRON MICROSCOPY
Resolution
5.5 Å

Loop

Sequence
UGACGG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4CSU_074 not in the Motif Atlas
Homologous match to HL_5J7L_190
Geometric discrepancy: 0.2001
The information below is about HL_5J7L_190
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

4CSU|1|B|U|2356
4CSU|1|B|G|2357
4CSU|1|B|A|2358
4CSU|1|B|C|2359
4CSU|1|B|G|2360
4CSU|1|B|G|2361

Current chains

Chain B
23S RRNA

Nearby chains

Chain 7
50S RIBOSOMAL PROTEIN L35
Chain L
50S RIBOSOMAL PROTEIN L15
Chain Y
50S RIBOSOMAL PROTEIN L27

Coloring options:


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