HL_4CXE_073
3D structure
- PDB id
- 4CXE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- UGAAUUGCAGGACACAUUGA
- Length
- 20 nucleotides
- Bulged bases
- 4CXE|1|3|C|83, 4CXE|1|3|U|85
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4CXE_073 not in the Motif Atlas
- Geometric match to HL_8CRE_075
- Geometric discrepancy: 0.2947
- The information below is about HL_8CRE_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_51921.1
- Basepair signature
- cWW-tSH-tSS-tHS-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4CXE|1|3|U|69
4CXE|1|3|G|70
4CXE|1|3|A|71
4CXE|1|3|A|72
4CXE|1|3|U|73
4CXE|1|3|U|74
4CXE|1|3|G|75
4CXE|1|3|C|76
4CXE|1|3|A|77
4CXE|1|3|G|78
4CXE|1|3|G|79
4CXE|1|3|A|80
4CXE|1|3|C|81
4CXE|1|3|A|82
4CXE|1|3|C|83
4CXE|1|3|A|84
4CXE|1|3|U|85
4CXE|1|3|U|86
4CXE|1|3|G|87
4CXE|1|3|A|88
Current chains
- Chain 3
- 5.8S RRNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: