HL_4DV4_017

3D structure

PDB id

4DV4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A914G

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

4DV4|1|A|U|793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4DV4_017 not in the Motif Atlas

Homologous match to HL_4LFB_017

Geometric discrepancy: 0.099

The information below is about HL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

4DV4|1|A|G|786
4DV4|1|A|A|787
4DV4|1|A|U|788
4DV4|1|A|U|789
4DV4|1|A|A|790
4DV4|1|A|G|791
4DV4|1|A|A|792
4DV4|1|A|U|793
4DV4|1|A|A|794
4DV4|1|A|C|795
4DV4|1|A|C|796

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

ribosomal protein S11