HL_4FAW_008

3D structure

PDB id

4FAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and a hydrolyzed oligonucleotide fragment

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GUUCGC

Length

6 nucleotides

Bulged bases

4FAW|1|A|U|340

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39895.11

Basepair signature

cWW-tSW-R

Number of instances in this motif group

46

Unit IDs

4FAW|1|A|G|338
4FAW|1|A|U|339
4FAW|1|A|U|340
4FAW|1|A|C|341
4FAW|1|A|G|342
4FAW|1|A|C|343

Current chains

Chain A

Group IIC intron

Nearby chains