HL_4KZX_019
3D structure
- PDB id
- 4KZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with eIF1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.81 Å
Loop
- Sequence
- UAUUUUGUUGGUUUUCG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4KZX_019 not in the Motif Atlas
- Homologous match to HL_4V88_205
- Geometric discrepancy: 0.4322
- The information below is about HL_4V88_205
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_88364.1
- Basepair signature
- cWW-cWW-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
4KZX|1|i|U|881
4KZX|1|i|A|882
4KZX|1|i|U|883
4KZX|1|i|U|884
4KZX|1|i|U|885
4KZX|1|i|U|886
4KZX|1|i|G|887
4KZX|1|i|U|888
4KZX|1|i|U|889
4KZX|1|i|G|890
4KZX|1|i|G|891
4KZX|1|i|U|892
4KZX|1|i|U|893
4KZX|1|i|U|894
4KZX|1|i|U|895
4KZX|1|i|C|896
4KZX|1|i|G|897
Current chains
- Chain i
- 18S ribosomal RNA
Nearby chains
- Chain G
- 40S ribosomal protein S6
- Chain L
- 40S ribosomal protein S11
Coloring options: