HL_4KZX_029

3D structure

PDB id

4KZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 40S ribosomal subunit in complex with eIF1.

Experimental method

X-RAY DIFFRACTION

Resolution

7.81 Å

Loop

Sequence

GUUAAUUC

Length

8 nucleotides

Bulged bases

4KZX|1|i|U|1367

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4KZX_029 not in the Motif Atlas

Homologous match to HL_4V88_215

Geometric discrepancy: 0.1973

The information below is about HL_4V88_215

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

4KZX|1|i|G|1362
4KZX|1|i|U|1363
4KZX|1|i|U|1364
4KZX|1|i|A|1365
4KZX|1|i|A|1366
4KZX|1|i|U|1367
4KZX|1|i|U|1368
4KZX|1|i|C|1369

Current chains

Chain i

18S ribosomal RNA

Nearby chains

Chain R

40S ribosomal protein S17