HL_4L47_144
3D structure
- PDB id
- 4L47 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.22 Å
Loop
- Sequence
- GUUCGG(1MG)GAC
- Length
- 10 nucleotides
- Bulged bases
- 4L47|1|XY|U|33
- QA status
- Modified nucleotides: 1MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4L47_144 not in the Motif Atlas
- Geometric match to HL_3MJA_001
- Geometric discrepancy: 0.3023
- The information below is about HL_3MJA_001
- Detailed Annotation
- Anticodon loop related
- Broad Annotation
- Anticodon loop related
- Motif group
- HL_41019.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4L47|1|XY|G|31
4L47|1|XY|U|32
4L47|1|XY|U|33
4L47|1|XY|C|34
4L47|1|XY|G|35
4L47|1|XY|G|36
4L47|1|XY|1MG|37
4L47|1|XY|G|37|||A
4L47|1|XY|A|38
4L47|1|XY|C|39
Current chains
- Chain XY
- messenger RNA
Nearby chains
- Chain XA
- Small subunit ribosomal RNA; SSU rRNA
- Chain XL
- 30S ribosomal protein S12
- Chain XM
- 30S ribosomal protein S13
- Chain XX
- A-site ASL SufA6
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: