HL_4L71_036
3D structure
- PDB id
- 4L71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- GUUCGG(1MG)GAC
- Length
- 10 nucleotides
- Bulged bases
- 4L71|1|QY|U|33
- QA status
- Modified nucleotides: 1MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4L71_036 not in the Motif Atlas
- Geometric match to HL_3MJA_001
- Geometric discrepancy: 0.2975
- The information below is about HL_3MJA_001
- Detailed Annotation
- Anticodon loop related
- Broad Annotation
- Anticodon loop related
- Motif group
- HL_41019.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4L71|1|QY|G|31
4L71|1|QY|U|32
4L71|1|QY|U|33
4L71|1|QY|C|34
4L71|1|QY|G|35
4L71|1|QY|G|36
4L71|1|QY|1MG|37
4L71|1|QY|G|37|||A
4L71|1|QY|A|38
4L71|1|QY|C|39
Current chains
- Chain QY
- messenger RNA
Nearby chains
- Chain QA
- Small subunit ribosomal RNA; SSU rRNA
- Chain QM
- 30S ribosomal protein S13
- Chain QX
- A-site ASL SufA6
- Chain RA
- Large subunit ribosomal RNA; LSU rRNA
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