3D structure

PDB id
4L71 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
UAUUGAAGCA
Length
10 nucleotides
Bulged bases
4L71|1|RA|C|574
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4L71_054 not in the Motif Atlas
Geometric match to HL_7RQB_018
Geometric discrepancy: 0.1207
The information below is about HL_7RQB_018
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_41998.1
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
69

Unit IDs

4L71|1|RA|U|566
4L71|1|RA|A|567
4L71|1|RA|U|568
4L71|1|RA|U|569
4L71|1|RA|G|570
4L71|1|RA|A|571
4L71|1|RA|A|572
4L71|1|RA|G|573
4L71|1|RA|C|574
4L71|1|RA|A|575

Current chains

Chain RA
23S Ribosomal RNA

Nearby chains

Chain R5
50S ribosomal protein L32
Chain RE
50S ribosomal protein L3
Chain RP
50S ribosomal protein L15
Chain RV
50S ribosomal protein L21

Coloring options:


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