HL_4L71_066

3D structure

PDB id

4L71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

4L71|1|RA|A|1095, 4L71|1|RA|A|1096

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4L71_066 not in the Motif Atlas

Homologous match to HL_6PRV_002

Geometric discrepancy: 0.5989

The information below is about HL_6PRV_002

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

4L71|1|RA|C|1092
4L71|1|RA|G|1093
4L71|1|RA|U|1094
4L71|1|RA|A|1095
4L71|1|RA|A|1096
4L71|1|RA|U|1097
4L71|1|RA|A|1098
4L71|1|RA|G|1099

Current chains

Chain RA

23S Ribosomal RNA

Nearby chains

Chain R9

50S ribosomal protein L36

Chain RH

50S ribosomal protein L6