3D structure

PDB id
4L71 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
GGAUGCAAAC
Length
10 nucleotides
Bulged bases
4L71|1|YA|U|747, 4L71|1|YA|A|751, 4L71|1|YA|A|752
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4L71_167 not in the Motif Atlas
Homologous match to HL_7RQB_023
Geometric discrepancy: 0.0743
The information below is about HL_7RQB_023
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_39334.6
Basepair signature
cWW-cWS-tSW-F-F
Number of instances in this motif group
6

Unit IDs

4L71|1|YA|G|744
4L71|1|YA|G|745
4L71|1|YA|A|746
4L71|1|YA|U|747
4L71|1|YA|G|748
4L71|1|YA|C|749
4L71|1|YA|A|750
4L71|1|YA|A|751
4L71|1|YA|A|752
4L71|1|YA|C|753

Current chains

Chain YA
23S Ribosomal RNA

Nearby chains

Chain Y5
50S ribosomal protein L32
Chain Y7
50S ribosomal protein L34
Chain YE
50S ribosomal protein L3
Chain YW
50S ribosomal protein L22

Coloring options:


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