3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
GAAGCAACGC
Length
10 nucleotides
Bulged bases
4LEL|1|QA|G|971
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LEL_021 not in the Motif Atlas
Homologous match to HL_4LFB_021
Geometric discrepancy: 0.1561
The information below is about HL_4LFB_021
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_50779.4
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
4

Unit IDs

4LEL|1|QA|G|963
4LEL|1|QA|A|964
4LEL|1|QA|A|965
4LEL|1|QA|G|966
4LEL|1|QA|C|967
4LEL|1|QA|A|968
4LEL|1|QA|A|969
4LEL|1|QA|C|970
4LEL|1|QA|G|971
4LEL|1|QA|C|972

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QI
30S ribosomal protein S9
Chain QJ
30S ribosomal protein S10
Chain QM
30S ribosomal protein S13
Chain QV
Transfer RNA; tRNA
Chain QY
messenger RNA

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.3055 s