3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
UUUACCAAAAA
Length
11 nucleotides
Bulged bases
4LEL|1|RA|A|1780, 4LEL|1|RA|C|1781, 4LEL|1|RA|C|1782, 4LEL|1|RA|A|1786
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4LEL_082 not in the Motif Atlas
Homologous match to HL_4WF9_043
Geometric discrepancy: 0.1237
The information below is about HL_4WF9_043
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_01962.2
Basepair signature
cWW-tWH-tWH-F
Number of instances in this motif group
6

Unit IDs

4LEL|1|RA|U|1777
4LEL|1|RA|U|1778
4LEL|1|RA|U|1779
4LEL|1|RA|A|1780
4LEL|1|RA|C|1781
4LEL|1|RA|C|1782
4LEL|1|RA|A|1783
4LEL|1|RA|A|1784
4LEL|1|RA|A|1785
4LEL|1|RA|A|1786
4LEL|1|RA|A|1787

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R7
50S ribosomal protein L34
Chain RD
50S ribosomal protein L2
Chain RW
50S ribosomal protein L22

Coloring options:


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