HL_4LNT_139

3D structure

PDB id

4LNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

4LNT|1|XA|U|1450, 4LNT|1|XA|A|1451, 4LNT|1|XA|G|1453

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4LNT_139 not in the Motif Atlas

Geometric match to HL_5TBW_004

Geometric discrepancy: 0.3981

The information below is about HL_5TBW_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86929.1

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

4LNT|1|XA|C|1449
4LNT|1|XA|U|1450
4LNT|1|XA|A|1451
4LNT|1|XA|C|1452
4LNT|1|XA|G|1453
4LNT|1|XA|G|1454

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XT

30S ribosomal protein S20

Chain YT

50S ribosomal protein L19