3D structure

PDB id
4P70 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
UAUUGAAGCA
Length
10 nucleotides
Bulged bases
4P70|1|YA|C|574
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4P70_160 not in the Motif Atlas
Geometric match to HL_7RQB_018
Geometric discrepancy: 0.0909
The information below is about HL_7RQB_018
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_41998.1
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
69

Unit IDs

4P70|1|YA|U|566
4P70|1|YA|A|567
4P70|1|YA|U|568
4P70|1|YA|U|569
4P70|1|YA|G|570
4P70|1|YA|A|571
4P70|1|YA|A|572
4P70|1|YA|G|573
4P70|1|YA|C|574
4P70|1|YA|A|575

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y5
50S ribosomal protein L32
Chain YE
50S ribosomal protein L3
Chain YP
50S ribosomal protein L15
Chain YV
50S ribosomal protein L21

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2192 s