3D structure

PDB id
4P70 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
CUGAAAGCAUCUAAG
Length
15 nucleotides
Bulged bases
4P70|1|YA|G|2751
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4P70_209 not in the Motif Atlas
Homologous match to HL_7RQB_066
Geometric discrepancy: 0.1073
The information below is about HL_7RQB_066
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_56677.7
Basepair signature
cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
Number of instances in this motif group
8

Unit IDs

4P70|1|YA|C|2745
4P70|1|YA|U|2746
4P70|1|YA|G|2747
4P70|1|YA|A|2748
4P70|1|YA|A|2749
4P70|1|YA|A|2750
4P70|1|YA|G|2751
4P70|1|YA|C|2752
4P70|1|YA|A|2753
4P70|1|YA|U|2754
4P70|1|YA|C|2755
4P70|1|YA|U|2756
4P70|1|YA|A|2757
4P70|1|YA|A|2758
4P70|1|YA|G|2759

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y9
50S ribosomal protein L36
Chain YH
50S ribosomal protein L6
Chain YN
50S ribosomal protein L13

Coloring options:


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