HL_4QJH_002
3D structure
- PDB id
- 4QJH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the Twister Ribozyme with the Nucleotide 5'- to the Cleavage Site Ordered at 4.1 A Resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.88 Å
Loop
- Sequence
- GUUACAAGCC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4QJH_002 not in the Motif Atlas
- Geometric match to HL_7A0S_012
- Geometric discrepancy: 0.242
- The information below is about HL_7A0S_012
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.3
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 15
Unit IDs
4QJH|1|B|G|39
4QJH|1|B|U|40
4QJH|1|B|U|41
4QJH|1|B|A|42
4QJH|1|B|C|43
4QJH|1|B|A|44
4QJH|1|B|A|45
4QJH|1|B|G|46
4QJH|1|B|C|47
4QJH|1|B|C|48
Current chains
- Chain B
- Twister Ribozyme
Nearby chains
- Chain A
- Twister Ribozyme
- Chain C
- Twister Ribozyme
- Chain D
- Twister Ribozyme
Coloring options: