3D structure

PDB id
4R4V (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the VS ribozyme - G638A mutant
Experimental method
X-RAY DIFFRACTION
Resolution
3.07 Å

Loop

Sequence
GUUGACUAC
Length
9 nucleotides
Bulged bases
4R4V|1|A|U|695
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
T-loop related
Broad Annotation
T-loop
Motif group
HL_84299.4
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
9

Unit IDs

4R4V|1|A|G|689
4R4V|1|A|U|690
4R4V|1|A|U|691
4R4V|1|A|G|692
4R4V|1|A|A|693
4R4V|1|A|C|694
4R4V|1|A|U|695
4R4V|1|A|A|696
4R4V|1|A|C|697

Current chains

Chain A
VS ribozyme RNA

Nearby chains

No other chains within 10Å

Coloring options:

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