HL_4RQF_002

3D structure

PDB id

4RQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

human Seryl-tRNA synthetase dimer complexed with one molecule of tRNAsec

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

UGCAA

Length

5 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4RQF_002 not in the Motif Atlas

Geometric match to HL_1HMH_006

Geometric discrepancy: 0.1536

The information below is about HL_1HMH_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52841.1

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

4RQF|1|C|U|26
4RQF|1|C|G|27
4RQF|1|C|C|28
4RQF|1|C|A|29
4RQF|1|C|A|44

Current chains

Chain C

selenocysteine tRNA

Nearby chains