4RQF Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4RQF_001 | 1/C/15:20A | tRNA D-loop | homologous HL_3W3S_001 HL_18141.3 | |
| HL_4RQF_003 | 1/C/47C:47H | GNRA | homologous HL_3RG5_007 HL_34789.5 | |
| HL_4RQF_004 | 1/C/53:61 | T-loop with 2 stacked bulged bases | homologous HL_3ADD_004 HL_33597.4 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4RQF_002 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4RQF_001 | 1/C/5B:7, 1/C/66:67A | Isolated non-canonical cWW pair | homologous IL_3RG5_002 IL_68118.5 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J5_4RQF_001 | 1/C/7:10, 1/C/25:26, 1/C/44:46, 1/C/47:50, 1/C/64:66 | No text annotation | homologous J5_3RG5_002 J5_22280.1 |
Problematic loops
No problematic loops
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