3D structure

PDB id
4TUA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
GGAUGCAAAC
Length
10 nucleotides
Bulged bases
4TUA|1|YA|U|747, 4TUA|1|YA|A|751
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4TUA_169 not in the Motif Atlas
Homologous match to HL_7RQB_023
Geometric discrepancy: 0.0564
The information below is about HL_7RQB_023
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_39334.6
Basepair signature
cWW-cWS-tSW-F-F
Number of instances in this motif group
6

Unit IDs

4TUA|1|YA|G|744
4TUA|1|YA|G|745
4TUA|1|YA|A|746
4TUA|1|YA|U|747
4TUA|1|YA|G|748
4TUA|1|YA|C|749
4TUA|1|YA|A|750
4TUA|1|YA|A|751
4TUA|1|YA|A|752
4TUA|1|YA|C|753

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y5
50S ribosomal protein L32
Chain Y7
50S ribosomal protein L34
Chain YE
50S ribosomal protein L3
Chain YW
50S ribosomal protein L22

Coloring options:


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