HL_4TUB_028

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GGCAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUB_028 not in the Motif Atlas

Homologous match to HL_4LFB_028

Geometric discrepancy: 0.1406

The information below is about HL_4LFB_028

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4TUB|1|QA|G|1265
4TUB|1|QA|G|1266
4TUB|1|QA|C|1267
4TUB|1|QA|A|1268
4TUB|1|QA|A|1269
4TUB|1|QA|C|1270

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QM

30S ribosomal protein S13

Chain QS

30S ribosomal protein S19

Chain QU

30S ribosomal protein Thx