HL_4TUB_068

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GGAUGAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUB_068 not in the Motif Atlas

Geometric match to HL_6U8D_003

Geometric discrepancy: 0.3356

The information below is about HL_6U8D_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.4

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

4TUB|1|RA|G|1217
4TUB|1|RA|G|1218
4TUB|1|RA|A|1219
4TUB|1|RA|U|1220
4TUB|1|RA|G|1221
4TUB|1|RA|A|1222
4TUB|1|RA|C|1223

Current chains

Chain RA

23S rRNA

Nearby chains