HL_4TUB_071

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GGUCGUC

Length

7 nucleotides

Bulged bases

4TUB|1|RA|G|1371, 4TUB|1|RA|U|1375

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUB_071 not in the Motif Atlas

Geometric match to HL_7RQB_034

Geometric discrepancy: 0.0792

The information below is about HL_7RQB_034

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46680.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

27

Unit IDs

4TUB|1|RA|G|1370
4TUB|1|RA|G|1371
4TUB|1|RA|U|1372
4TUB|1|RA|C|1373
4TUB|1|RA|G|1374
4TUB|1|RA|U|1375
4TUB|1|RA|C|1376

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RR

50S ribosomal protein L17

Chain RW

50S ribosomal protein L22