HL_4TUB_078

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

4TUB|1|RA|A|1660, 4TUB|1|RA|A|1662, 4TUB|1|RA|A|1664

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUB_078 not in the Motif Atlas

Homologous match to HL_4WF9_038

Geometric discrepancy: 0.0919

The information below is about HL_4WF9_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_28592.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

11

Unit IDs

4TUB|1|RA|C|1658
4TUB|1|RA|G|1659
4TUB|1|RA|A|1660
4TUB|1|RA|C|1661
4TUB|1|RA|A|1662
4TUB|1|RA|C|1663
4TUB|1|RA|A|1664
4TUB|1|RA|G|1665

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R7

50S ribosomal protein L34

Chain RW

50S ribosomal protein L22