3D structure

PDB id
4TUC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
CUGAAAGCAUCUAAG
Length
15 nucleotides
Bulged bases
4TUC|1|RA|G|2751
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4TUC_103 not in the Motif Atlas
Homologous match to HL_7RQB_066
Geometric discrepancy: 0.1618
The information below is about HL_7RQB_066
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_56677.7
Basepair signature
cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
Number of instances in this motif group
8

Unit IDs

4TUC|1|RA|C|2745
4TUC|1|RA|U|2746
4TUC|1|RA|G|2747
4TUC|1|RA|A|2748
4TUC|1|RA|A|2749
4TUC|1|RA|A|2750
4TUC|1|RA|G|2751
4TUC|1|RA|C|2752
4TUC|1|RA|A|2753
4TUC|1|RA|U|2754
4TUC|1|RA|C|2755
4TUC|1|RA|U|2756
4TUC|1|RA|A|2757
4TUC|1|RA|A|2758
4TUC|1|RA|G|2759

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R9
50S ribosomal protein L36
Chain RH
50S ribosomal protein L6
Chain RN
50S ribosomal protein L13

Coloring options:


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